Highly Parallel SNP Genotyping Key paper describing the Golden Gate genotyping assay in use by our facility.
Enhancing Linkage Analysis of Complex Disorders: an Evaluation of High-density Genotyping Comparison of several platforms used in linkage analysis of a multiple sclerosis study.
Decoding Randomly Ordered DNA Arrays Paper describing algorithms used to match the deposited bead positions with given address sequences.
TOP/BOT Strand and “A/B” Allele Paper from Illumina discussing their rules for assigning the top and bottom strands, and the A and B alleles, for SNP sequences submitted by users.
Genotyping Data Normalization Methods Paper from Illumina discussing their methods for normalizing signal intensities in the Golden Gate Genotyping assay.